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Changelog

Source: NEWS.md

landsepi 1.5.1 (2024-09-23)

CRAN release: 2024-09-23

  • fixed bugs

landsepi 1.5.0 (2024-09-02)

CRAN release: 2024-09-03

  • Redesigned shiny app: simplified parameterization, include global/local inoculum, include more outputs (graphics & tables)
  • Updated webpage

landsepi 1.4.0 (2024-03-12)

CRAN release: 2024-03-12

  • [breaking change] Changed parameterization of inoculum to allow specific spatial location and genetic composition of inoculum (thanks to Manon)
  • Changed parameterization of pathogen survival probability to allow different probabilities for different croptypes and years
  • Added 2 parameters (adaptation_cost and relative_advantage) to allow two types of fitness costs paid by pathogens adapted to resistance (on all hosts, or only for unnecessary virulence)
  • Help parameterization of treatments with loadTreatment()
  • Updated documentation and vignettes

landsepi 1.3.0 (2023-07-19)

CRAN release: 2023-07-19

  • [breaking change] Added parameterization of grapevine mildew (thanks to Marta)
  • [breaking change] Added parameterization of black sigatoka of banana
  • [breaking change] Added contact chemical treatments
  • Changed the dynamics of host growth
  • Added the output contribution
  • Updated documentation and vignettes

landsepi 1.2.2 (2022-10-06)

CRAN release: 2022-10-06

  • [breaking change] Added sexual reproduction with gene recombination (thanks to Marta)
  • [breaking change] loadDispersalPathogen() now return a list of two matrix, the first for clonal and the second for sexual reproductions
  • Changed the mutation process
  • Updated Shiny app
  • Added a NEWS.md file to track changes to the package
  • Updated documentation and vignettes

landsepi 1.1.0 (2021-07-26)

CRAN release: 2021-07-26

  • Updated Shiny app
  • Updated documentation & vignettes
  • Added economic parameters and outputs

landsepi 1.0.1 (2020-07-02)

CRAN release: 2020-07-02

  • [breaking change] Added simulation of real landscapes using shapefiles
  • [breaking change] Created a Shiny app (thanks to Jean-Loup)
  • Created vignettes (tutorials)
  • Added multiple epidemiological and evolutionary outputs
  • Added Adult Plant Resistance (APR) genes

landsepi 0.0.2 (2018-03-26)

CRAN release: 2018-03-26

  • Creation of the package
  • Parameterization for rusts of cereal crops